2011 Publications and Scientific Activities |
| 1 | Beu, S.C.; Hendrickson, C.L. and Marshall, A.G., Excitation of Radial Ion Motion in RF-Only Multipole Ion Guides Immersed in a Strong Magnetic Field Gradient, J. Am. Soc. Mass Spectr., 22, 591-601 (2011) |
| 2 | Bou-Assaf, G.M.; Chamoun, J.E.; Emmett, M.R.; Fajer, P.G. and Marshall, A.G., Complexation and Calcium-Induced Conformational Changes in the Cardiac Troponin Complex Monitored by Hydrogen/Deuterium Exchange and FT-ICR Mass Spectrometry, Int. J. Mass Spectrom., 302, 116-124 (2011) |
| 3 | Fang, P.; Zhang, H.-M.; Shapiro, R.; Marshall, A.G.; Schimmel, P.; Yang, X.-L. and Guo, M., Structural Context for Control of Nuclear Mobilization of a Human tRNA Synthetase from the Cytoplasmic MSC, P. Natl. Acad. Sci. U.S.A., 108, 8239-8244 (2011) |
| 4 | He, H.; Rodgers, R.P.; Marshall, A.G. and Hsu, C.S., Algae Polar Lipids Characterized by Online Liquid Chromatography Coupled with Hybrid Linear Quadrupole Ion Trap.Fourier Transform ion Cyclotron Resonance Mass Spectrometry, Energy & Fuels, 25, 4770-4775 (2011) [read online] |
| 5 | He, W.; Zhang, H.-M.; Chong, Y.E.; Guo, M.; Marshall, A.G. and Yang, X.-L., Dispersed Disease-Causing Neomorphic Mutations on a Single Protein Promote the Same Localized Conformational Opening, P. Natl. Acad. Sci. U.S.A., 108, 12307-12312 (2011) |
| 6 | Hsu, C.S.; Hendrickson, C.L.; Rodgers, R.P.; McKenna, A.M. and Marshall, A.G., Petroleomics: advanced molecular probe for petroleum heavy ends, J. Mass Spectrometry, 46, 337-343 (2011) [read online] |
| 7 | Hsu, C.S.; Lobodin, V.V.; Rodgers, R.P.; McKenna, A.M. and Marshall, A.G., Compositional Boundaries for Fossil Hydrocarbons, Energy & Fuels, 25, 2174-2178 (2011) [read online] |
| 8 | Juyal, P.; McKenna, A.M.; Yen, A.; Rodgers, R.P.; Reddy, C.M.; Nelson, R.K.; Andrews, A.B.; Allenson, S.J.; Mullins, O.C.; Atolia, E. and Marshall, A.G., Analysis and Identification of Biomarkers and Origin of Color in a Bright Blue Crude Oil, Energy & Fuels, 25, 172-182 (2011) |
| 9 | Kaiser, N.K.; Quinn, J.P.; Blakney, G.T.; Hendrickson, C.L. and Marshall, A.G., A Novel 9.4 Tesla FT-ICR Mass Spectrometer with Improved Sensitivity, Mass Resolution, and Mass Range, J. Am. Soc. Mass Spectr., 22, 1343-1351 (2011) |
| 10 | Mapolelo, M.M.; Rodgers, R.P.; Blakney, G.T.; Yen, A.T.; Asomaning, S. and Marshall, A.G., Characterization of Naphthenic Acids in Crude Oils and Naphthenates by Electrospray Ionization FT-ICR Mass Spectrometry, Int. J. Mass Spectrom., 300, 149-157 (2011) |
| 11 | Mino, Jr., W.K.; Gulyuz, K.; Wang, D.; Stedwell, C.N. and Polfer, N.C., Gas-phase structure and dissociation chemistry of protonated tryptophan elucidated by infrared multiple-photon dissociation spectroscopy, J. Phys. Chem. Lett., 2, 299-304 (2011) |
| 12 | Nyadong, L.; McKenna, A.M.; Hendrickson, C.L.; Rodgers, R.P. and Marshall, A.G., Atmospheric Pressure Laser-Induced Acoustic Desorption Chemical Ionization (AP/LIAD-CI) Fourier Transform Ion Cyclotron Resonance Mass Spectrometry for the Analysis of Complex Mixtures, Anal. Chem., 83, 1616-1623 (2011) |
| 13 | Rodgers, R.P. and McKenna, A.M., Petroleum Analysis, Anal. Chem., 83, 4665-4687 (2011) |
| 14 | Ruddy, B.M.; Beu, S.C.; Kaiser, N.K.; Hendrickson, C.L. and Marshall, A.G., Coulombic Shielding During Ion Cyclotron Excitation in FT-ICR Mass Spectrometry, Int. J. Mass Spectrom., 301, 220-223 (2011) |
| 15 | Savory, J.J.; Kaiser, N.K.; McKenna, A.M.; Xian, F.; Blakney, G.T.; Rodgers, R.P.; Hendrickson, C.L. and Marshall, A.G., Parts-Per-Billion Fourier Transform Ion Cyclotron Resonance Mass Measurement Accuracy with a 'Walking' Calibration Equation, Anal. Chem., 83, 1732-1736 (2011) |
2010 Publications and Scientific Activities |
| 1 | Althaus, E.; Canzar, S.; Ehrler, C.; Emmett, M.R.; Karrenbauer, A.; Marshall, A.G.; Meyer-Baese, A.; Tipton, J.D. and Zhang, H.-M., Computing H/D-Exchange Rates of Single Residues from Data of Proteolytic Fragments, BMC Bioinformatics, 11, 424-436 (2010) |
| 2 | Bou-Assaf, G.M.; Chamoun, J.E.; Emmett, M.R.; Fajer, P.G. and Marshall, A.G., Advantages of Isotopic Depletion of Proteins for Hydrogen/Deuterium Exchange Experiments Monitored by Mass Spectrometry, Anal. Chem., 82 (8), 3293-3299 (2010) [read online] |
| 3 | Capley, E.N.; Stenson, A.C.; Tipton, J.D. and Marshall, A.G., Chromatographic Reduction of Isobaric and Isomeric Complexity of Fulvic Acids To Enable Multistage Tandem Mass Spectral Characterization, Anal. Chem., 82, 8194-8202 (2010) |
| 4 | Cory, R.M.; McNeill, K.; Cotner, J.P.; Amado, A.; Purcell, J.M. and Marshall, A.G., Singlet Oxygen in the Coupled Photochemical and Biochemical Oxidation of Dissolved Organic Matter, Environ. Sci. Technol., 44, 3683-3689 (2010) |
| 5 | D'Andrilli, J.; Chanton, J.P.; Glaser, P.H. and Cooper, W.T., Characterization of dissolved organic matter in northern peatland soil porewaters by ultra high resolution mass spectrometry, Organic Geochemistry, 41 (8), 791-799 (2010) |
| 6 | D'Andrilli, J.; Dittmar, T.; Koch, B.P.; Purcell, J.M.; Marshall, A.G. and Cooper, W.T., Comprehensive Characterization of Marine Dissolved Organic Matter Using FT-ICR Mass Spectrometry with Electrospray and Atmospheric Pressure Photoionization, Rapid Commun. Mass Sp., 24, 643-650 (2010) |
| 7 | Dian, D.P.; Leavitt, C.M.; Oomens, J.; Steill, J.D.; Groenewold, G.S. and Van Stipdonk, M.J., Infrared multiple photon dissociation spectroscopy of sodium and potassium chlorate anions, Rapid Commun. Mass Sp., 24 (2), 232-238 (2010) |
| 8 | Edwards, A.A.; Tipton, J.D.; Brenowitz, M.D.; Emmett, M.R.; Marshall, A.G.; Evans, G.B.; Tyler, P.C. and Schramm, V.L., Conformational States of Human Purine Nucleoside Phosphorylase at Rest, at Work, and with Transition State Analogues, Biochemistry, 49 (9), 2058-67 (2010) [read online] |
| 9 | Groenewold, G.S.; van Stipdonk, M.J.; Oomes, J.; de Jong, W.A.; Gresham, G.L. and Mcllwain, M.E., Vibrational spectra of discrete UO22+ halide complexes in the gas phase, Int. J. Mass Spectrom., 297 (1-3), 67-75 (2010) |
| 10 | Guan, S.H. and Burlingame, A.L., High Mass Selectivity for Top-Down Proteomics by Application of SWIFT Technology, J. Am. Soc. Mass Spectr., 21, 455-459 (2010) |
| 11 | Görke, R.; Meyer-Bäse, A.; Wagner, D.; He, H.; Emmett, M.R.; Marshall, A.G. and Conrad, C.A., Determining and Interpreting Correlations in Lipidomic Networks Found in Glioblastoma Cells, BMC Biology, 4, 126-141 (2010) |
| 12 | He, H.; Nilsson, C.L.; Emmett, M.R.; Ji, Y.; Marshall, A.G.; Kroes, R.A.; Moskal, J.R.; Colman, H.; Lang, F.F. and Conrad, C.A., Polar Lipid Remodeling and Increased Sulfatide Expression are Associated with the Glioma Therapeutic Candidates, Wild Type p53 Elevation and the Topoisomerase-1 Inhibitor, Irinotecan, Glycoconjugate Journal, 27, 27-38 (2010) |
| 13 | He, H.; Nilsson, C.L.; Emmett, M.R.; Marshall, A.G.; Kroes, R.A.; Moskal, J.R.; Ji, Y.; Colman, H.; Priebe, W.; Lang, F.F. and Conrad, C.A., Glycomic and Transcriptomic Response of GSC11 Glioblastoma Stem Cells to STAT3 Phosphorylation Inhibition and Serum-induced Differentiation, J. Proteome Res., 9, 2098-2108 (2010) |
| 14 | Headley, J.V.; Armstrong, S.A.; Peru, K.M.; Mikula R.J.; Germida, J.J.; Mapolelo, M.M.; Rodgers, R.P. and Marshall, A.G., Ultrahigh Resolution Mass Spectrometry of Simulated Run-Off from Treated Oil Sands Mature Fine Tailings, Rapid Commun. Mass Sp., 24, 2400-2406 (2010) |
| 15 | Headley, J.V.; Peru, K.M.; Mishra, S.; Meda, V.; Dalai, A.K.; McMartin, D.W.; Mapolelo, M.M.; Rodgers, R.P. and Marshall, A.G., Characterization of Oil Sands Naphthenic Acids Treated with UV and Microwave Radiation by Negative Ion Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Rapid Commun. Mass Sp., 24, 3121-3126 (2010) |
| 16 | Hsu, C.S., Definition of Hydrogen Deficiency for Hydrocarbons with Functional Groups, Energy & Fuels, 24, 4097-4098 (2010) [read online] |
| 17 | Kaczorowska, M.A.; Hotze, A.C.G.; Hannon, M.M. and Cooper, H.J., Electron Capture Dissociation Mass Spectrometry of Metallo-Supramolecular Complexes, J. Am. Soc. Mass Spectr., 21, 300-309 (2010) |
| 18 | Kazazic, S.; Zhang, H.-M.; Schaub, T.M.; Emmett, M.R.; Hendrickson, C.L.; Blakney, G.T. and Marshall, A.G., Automated Data Reduction for Hydrogen/Deuterium Exchange Experiments, Enabled by High-Resolution Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, J. Mass Spectrometry, 21, 550-558 (2010) |
| 19 | Kroes, R.A.; He, H.; Emmett, M.R.; Nilsson, C.L.; Marshall, A.G. and Moskal, J.R., Overexpression of ST6GalNAcV, a ganglioside-specific α2,6 sialyltransferase, inhibits glioma invasivity, P. Natl. Acad. Sci. U.S.A., 107 (28), 12646-12651 (2010) |
| 20 | Marshall, A.G.; Beu, S.C.; Blakney, G.T.; Hendrickson, C.L.; McKenna, A.M.; Purcell, J.M.; Rodgers, R.P. and Xian, F., Petroleomics: A Test Bed for Ultrahigh-Resolution Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Eur. J. Mass Spectrometry, 16, 367-371 (2010) |
| 21 | Mazzoleni, L.R.; Ehrmann, B.; Shen, X.; Marshall, A.G. and Collett, J.L., Water-Soluble Atmospheric Organic Matter in Fog Water: Exact Masses and Empirical Formula Identification by Ultrahigh-Resolution FT-ICR Mass Spectrometry, Environ. Sci. Technol., 44 (10), 3690–3697 (2010) [read online] |
| 22 | McKenna, A.M.; Blakney, G.T.; Xian, F.; Glaser, P.B.; Rodgers, R.P. and Marshall, A.G., Heavy Petroleum Composition 2. Progression of the Boduszynski Model to the Limit of Distillation by Ultrahigh Resolution FT-ICR Mass Spectrometry, Energy & Fuels, 24, 2939-2946 (2010) |
| 23 | McKenna, A.M.; Purcell, J.M.; Rodgers, R.P. and Marshall, A.G., Heavy Petroleum Composition 1. Exhaustive Compositional Analysis of Athabasca Bitumen HVGO Distillates by Fourier Transform Ion Cyclotron Resonance Mass Spectrometry: A Definitive Test of the Boduszynski Model, Energy & Fuels, 24, 2929-2938 (2010) |
| 24 | Mino, W.K.; Szczepanski, J.; Pearson, W.L.; Powell, D.H.; Dunbar, R.C.; Eyler, J.R. and Polfer, N.C., Vibrational signatures of zwitterionic and charge-solvated structures for alkaline earth-tryptophan dimer complexes in the gas phase, Int. J. Mass Spectrom., 297 (1-3), 131-138 (2010) |
| 25 | Mosher, J.J.; Klein, G.C.; Marshall, A.G. and Findlay, R.H., Influence of Bedrock Geology on Dissolved Organic Matter Quality in Stream Water, Organic Geochemistry, 41, 1177-1188 (2010) |
| 26 | Pomerantz, A.E.; Ventura, G.T.; McKenna, A.M.; Cañas, J.A.; Auman, J.; Koerner, K.; Curry, D.; Nelson, R.K.; Reddy, C.M.; Rodgers, R.P.; Marshall, A.G.; Peters, K.E. and Mullins, O.C., Combining Biomarker and Bulk Compositional Gradient Analysis to Assess Reservoir Connectivity, Organic Geochemistry, 41, 812-821 (2010) |
| 27 | Purcell, J.M.; Merdrignac, I.; Rodgers, R.P.; Marshall, A.G.; Gauthier, T. and Guibard, I., Stepwise Structural Characterization of Asphaltenes During Deep Hydroconversion Processes Determined by Atmospheric Pressure Photoionization (APPI) Fourier Transform Ion Cyclotron Resonance (FT-ICR) Mass Spectrometry, Energy & Fuels, 24, 2257-2265 (2010) |
| 28 | Rummel, J.L.; McKenna, A.M.; Marshall, A.G.; Eyler, J.R. and Powell, D.H., The Coupling of Direct Analysis in Real Time Ionization to Fourier Transform Ion Cyclotron Resonance Mass Spectrometry for Ultra-High Resolution Mass Analysis, Rapid Commun. Mass Sp., 24, 784-790 (2010) |
| 29 | Valeja, S.; Tipton, J.D.; Emmett, M.R. and Marshall, A.G., New Reagents for Enhanced Liquid Chromatographic Separation and Charging of Intact Protein Ions for Electrospray Ionization Mass Spectrometry, Anal. Chem., 82, 7515-7519 (2010) |
| 30 | Wang, X.; Emmett, M.R. and Marshall, A.G., Liquid Chromatography Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometric Characterization of N-linked Glycans and Glycopeptides, Anal. Chem., 82, 6542-6548 (2010) |
| 31 | Wang, X.; Tipton, J.D.; Emmett, M.R. and Marshall, A.G., Sites and extent of selenomethionine incorporation into recombinant Cas6 protein by top-down and bottom-up proteomics with 14.5 T Fourier transform ion cyclotron resonance mass spectrometry, Rapid Commun. Mass Sp., 24, 2386-2392 (2010) |
| 32 | Xian, F.; Hendrickson, C.L.; Blakney, G.T.; Beu, S.C. and Marshall, A.G., Automated Broadband Phase Correction of Fourier Transform Ion Cyclotron Resonance Mass Spectra, Anal. Chem., 82, 8807-8812 (2010) |
| 33 | Zhang, H.-M.; McLoughlin, S.M.; Frausto, S.D.; Tang, H.; Emmett, M.R. and Marshall, A.G., Simultaneous Reduction and Digestion of Proteins with Disulfide Bonds for Hydrogen/Deuterium Exchange Monitored by Mass Spectrometry, Anal. Chem., 82, 1450-1454 (2010) |
| 34 | Zhang, H.-M.; Yu, X.; Greig, M.J.; Gajiwala, K.S.; Wu, J.C.; Diehl, W.; Lunney, E.A.; Emmett, M.R. and Marshall, A.G., Drug Binding and Resistance Mechanism of KIT Tyrosine Kinase Revealed by Hydrogen/Deuterium Exchange FT-ICR Mass Spectrometry, Protein Science, 19, 703-715 (2010) |
| 35 | Zhang, Y.; Askenazi, M.; Jiang, J.R.; Luckey, C.J.; Griffin, J.D. and Marto, J.A., Robust Error Model for iTRAQ Quantification Reveals Divergent Signaling between Oncogenic FLT3 Mutants in Acute Myeloid Leukemia, Molecular & Cellular Proteomics, 9, 780-790 (2010) |
2009 Publications and Scientific Activities |
| 1 | Brodbelt, J.S. and Marshall, A.G., Report of the 24th Asilomar Conference on Mass Spectrometry, J. Am. Soc. Mass Spectr., 20, R1 - R3 (2009) |
| 2 | Chen, X.; Yu, L.; Steill, J.D.; Oomens, J. and Polfer, N.C., Effect of Peptide Fragment Size on the Propensity of Cyclization in Collision-Induced Dissociation: Oligoglycine b(2)-b(8), J. Am. Chem. Soc., 131 (51), 18272-18282 (2009) |
| 3 | Frantom, P.A.; Zhang, H.-M.; Emmett, M.R.; Marshall, A.G. and Blanchard, J.S., Mapping of the Allosteric Network in the Regulation of α-Isopropylmalate Synthase from Mycobacterium tuberculosis by the Feedback Inhibitor L-Leucine: Solution-Phase H/D Exchange Monitored by FT-ICR Mass Spectrometry, Biochemistry, 48, 7457-7464 (2009) |
| 4 | Gajiwala, K.S.; Wu, J.C.; Christensen, J.; Deshmukh, G.D.; Diehl, W.; DiNitto, J.P.; English, J.M.; Greig, M.; He, Y.-A.; Jacques, S.L.; Lunney, E.A.; McTigue, M.; Molina, D.; Quenzer, T.A.; Wells, P.A.; Yu, X.; Zhang, Y.; Zou, A.; Emmett, M.R.; Marshall, A.G.; Zhang, H.-M. and Demetri, G., KIT Kinase Mutants Show Unique Mechanisms of Drug Resistance to Imatinib and Sunitinib in Gastrointestinal Stromal Tumor Patients, P. Natl. Acad. Sci. U.S.A., 106, 1542-1547 (2009) |
| 5 | Haapala, M.; Purcell, J.M.; Saarela, V.; Franssila, S.; Rodgers, R.P.; Hendrickson, C.L.; Kotiaho, T.; Marshall, A.G. and Kostiainen, R., Microchip Atmospheric Pressure Photoionization for Analysis of Petroleum by Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Anal. Chem., 81, 2799-2803 (2009) |
| 6 | Hamidane, H.B.; He, H.; Tsybin, O.Yu.; Emmett, M.R.; Hendrickson, C.L.; Marshall, A.G. and Tsybin, Y.O., Periodic Sequence Distribution of Product Ion Abundances in Electron Capture Dissociation of Amphipathic Peptides and Proteins, J. Mass Spectrometry, 20, 1182-1192 (2009) |
| 7 | Headley, J.V.; Peru, K.M.; Armstrong, S.; Han, X.; Martin, J.W.; Mapolelo, M.M.; Smith, D.F.; Rodgers, R.P. and Marshall, A.G., Comparison of Aquatic Plant Derived Changes in Aqueous Naphthenic Acid Profiles Determined by ESI/MS, HPLC/QTOF MS and FT-ICR MS, Rapid Commun. Mass Sp., 23, 515-522 (2009) |
| 8 | Hendrickson, C.L.; Beu, S.C.; Blakney, G.T. and Marshall, A.G., SIMION Modeling of Ion Image Charge Detection in Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Int. J. Mass Spectrom., 283, 100-104 (2009) |
| 9 | Hockaday, W.C.; Purcell, J.M.; Marshall, A.G.; Baldock, J.A. and Hatcher, P.G., Electrospray and Photoionization Mass Spectrometry for the Characterization of Organic Matter in Natural Waters: A Qualitative Assessment, Limnology and Oceanography: Methods, 7, 81-95 (2009) |
| 10 | Kim, S.; Rodgers, R.P.; Blakney, G.T.; Hendrickson, C.L. and Marshall, A.G., Automated Electrospray Ionization FT-ICR Mass Spectrometry for Petroleum Analysis, J. Mass Spectrometry, 20, 263-268 (2009) |
| 11 | Lee, J.E.; Kellie, J.F.; Tran, J.C.; Tipton, J.D.; Catherman, A.D.; Thomas, H.M.; Ahif, D.R.; Durbin, K.R.; Vellaichamy, A.; Ntai, I.; Marshall, A.G. and Kelleher, N.L., A Robust Two-Dimensional Separation for Top-Down Tandem Mass Spectrometry of the Low-Mass Proteome, J. Am. Soc. Mass Spectr., 20 (12), 2183-2191 (2009) |
| 12 | Ma, M.; Chen, R.; Ge, Y.; He, H.; Marshall, A.G. and Li, L., Combining Bottom-Up and Top-Down Mass Spectrometric Strategies for de Novo Sequencing of the Crustacean Hyperglycemic Hormone (CHH) from Cancer borealis, Anal. Chem., 81, 240-247 (2009) |
| 13 | Mapolelo, M.M.; Stanford, L.A.; Rodgers, R.P.; Yen, A.T.; Debord, J.D.; Asomaning, S. and Marshall, A.G., Chemical Speciation of Calcium and Sodium Naphthenate Deposits by Electrospray Ionization FT-ICR Mass Spectrometry, Energy & Fuels, 23, 349-355 (2009) |
| 14 | McKenna, A.M.; Purcell, J.M.; Rodgers, R.P. and Marshall, A.G., Identification of Vanadyl Porphyrins in a Heavy Crude Oil and Raw Asphaltene by Atmospheric Pressure Photoionization FT-ICR Mass Spectrometry, Energy & Fuels, 23, 2122-2128 (2009) |
| 15 | Meyer-Baese, A.; Koshkouei, A.J.; Emmett, M.R. and Goodall, D.P., Global stability analysis and robust design of multi-time-scale biological networks under parametric uncertainties, Neural Networks, 22, 658-663 (2009) |
| 16 | Schäfer, M.; Drayss, M.K.; Blunk, D.; Purcell, J.M.; Hendrickson, C.L.; Marshall, A.G.; Mookherjee, A. and Armentrout, P.B., Kinetic Determination of Potassium Affinities by IRMPD: Elucidation of Precursor Ion Structures, J. Phys. Chem. A, 113, 7779-7783 (2009) |
| 17 | Smith, D.F.; Rodgers, R.P.; Rahimi, P.; Teclemariam, A. and Marshall, A.G., Effect of Thermal Treatment on Acidic Organic Species from Athabasca Bitumen Heavy Vacuum Gas Oil, Analyzed by Negative-Ion Electrospray FT-ICR Mass Spectrometry, Energy & Fuels, 23, 214-319 (2009) |
| 18 | Soraya, S.; Betancourt, S.S.; Ventura, G.T.; Pomerantz, A.E.; Viloria, O.; Dubost, F.X.; Zuo, J.; Monson, G.; Bustamante, D.; Purcell, J.M.; Nelson, R.K.; Rodgers, R.P.; Reddy, C.M.; Marshall, A.G. and Mullins, O.C., Nanoaggregates of Asphaltenes in a Reservoir Crude Oil and Reservoir Connectivity, Energy & Fuels, 23, 1178-1188 (2009) |
| 19 | Tipton, J.D.; Carter, J.D.; Mathias, J.D.; Emmett, M.R.; Fanucci, G.E. and Marshall, A.G., Sequential Proteolysis and High-Field FTICR MS To Determine Disulfide Connectivity and 4-Maleimide TEMPO Spin-Label Location in L126C GM2 Activator Protein, Anal. Chem., 81 (18), 7611-7617 (2009) [read online] |
| 20 | Yi, K.; Wang, X.; Emmett, M.R.; Marshall, A.G.; Stewart, M. and Roberts, T.M., Dephosphorylation of MSP Fiber Protein 3 (MFP3) by PP2A During Cell Body Retraction in the MSP-Based Amoeboid Motility of Ascaris Sperm, Molecular Biology of the Cells, 20, 3200-3208 (2009) |
| 21 | Zhang, H-M; Bou-Assaf, G.M.; Emmett, M.R. and Marshall, A.G., Fast Reversed-Phase Liquid Chromatography to Reduce Back-Exchange and Increase Throughput in H/D Exchange Monitored by FT-ICR Mass Spectrometry, J. Am. Soc. Mass Spectr., 20 (3), 520-524 (2009) |
2008 Publications and Scientific Activities |
| 1 | Al-Hajji, A.A.; Muller, H. and Koseoglu, O.R., Characterization of Nitrogen and Sulfur Compounds in Hydrocracking Feedstocks by Fourier Transform Ion Cyclotron Mass Spectrometry, Oil & Gas Science and Technology – Rev. IFP, 63 (1), 25-54 (2008) |
| 2 | Altieri, K.E.; Seitzinger, S.P.; Carlton, A.G.; Turpin, B.J.; Klein, G.C. and Marshall, A.G., Oligomers Formed Through In-Cloud Methylglyoxal Reactions: Chemical Composition, Properties, and Mechanisms Investigated by Ultra-High Resolution FT-ICR Mass Spectrometry, Atmospheric Environment, 42, 1476-1490 (2008) |
| 3 | Hughey, C.A.; Minardi, C.S.; Galasso-Roth, S.A.; Paspalof, G.B.; Mapolelo, M.M.; Rodgers, R.P.; Marshall, A.G. and Ruderman, D.L., Naphthenic Acids as Indicators of Crude Oil Biodegrad'n in Contaminated Soil, Based on Semi-Quantitative ESI FT-ICR MS, Rapid Commun. Mass Sp., 22, 3968-3976 (2008) |
| 4 | Iniesta, J.; Cooper, H.J.; Marshall, A.G.; Heptinstall, J.; Walton, D.J. and Peterson, I.R., Specific Electrochemical Iodination of Horse Heart Myoglobin at Tyrosine 103 as Determined by Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Arch. Biochem. Biophys., 474, 1-7 (2008) |
| 5 | Kim, S.; Choi, M.C.; Hur, M.; Kim, H.S.; Yoo, J.S.; Hendrickson, C.L. and Marshall, A.G., The 'Hybrid Cell': A New Compensated Infinity Cell for Larger Radius Ion Excitation in Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Rapid Commun. Mass Sp., 22, 1423-1429 (2008) |
| 6 | Marshall, A.G. and Hendrickson, C.L., High-Resolution Mass Spectrometers, Anal. Chem., 1, 579-599 (2008) |
| 7 | Marshall, A.G. and Rodgers, R.P., Petroleomics: Chemistry of the Underworld, P. Natl. Acad. Sci. U.S.A., 105, 18090-18095 (2008) |
| 8 | Mullins, O.C.; Martinex-Haya, B. and Marshall, A.G., Contrasting Perspective on Asphaltene Molecular Weight: This Comment vs. the Overview of A. A. Herod, K. D. Bartle, and R. Kandiyoti, Energy & Fuels, 22, 1765-1773 (2008) |
| 9 | Schaub, T.M.; Hendrickson, C.L.; Horning, S.; Quinn, J.P.; Senko, M.W. and Marshall, A.G., High Performance Mass Spectrometry: Fourier Transform Ion Cyclotron Resonance at 14.5 Tesla, Anal. Chem., 80, 3985-3990 (2008) |
| 10 | Smith, D.F.; Klein, G.C.; Yen, A.T.; Squicciarini, M.P.; Rodgers, R.P. and Marshall, A.G., Crude Oil Polar Chemical Composition Derived from FT-ICR Mass Spectrometry Accounts for Asphaltene Inhibitor Specificity, Energy & Fuels, 22, 3112-3117 (2008) |
| 11 | Smith, D.F.; Rahimi, P.; Teclemariam, A.; Rodgers, R.P. and Marshall, A.G., Characterization of Athabasca Bitumen Heavy Vacuum Gas Oil Distillation Cuts by Negative/Positive Electrospray Ionization and Automated Liquid Injection Field Desorption Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Energy & Fuels, 22, 3118-3125 (2008) |
| 12 | Smith, D.F.; Schaub, T.M.; Kim, S.; Rahimi, P.; Techlemariam, A.; Rodgers, R.P. and Marshall, A.G., Characterization of Acidic Species in Athabasca Bitumen and Bitumen Heavy Vacuum Gas Oil by Negative-Ion ESI FT-ICR MS with and without Acid-Ion Exchange Resin Prefractionation, Energy & Fuels, 22, 2372-2378 (2008) |
| 13 | Smith, D.F.; Schaub, T.M.; Rodgers, R.P.; Hendrickson, C.L. and Marshall, A.G., Automated Liquid Injection Field Desorption Ionization for Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Anal. Chem., 80, 7379-7382 (2008) |
| 14 | Smith, J.; Abadi, G.; Noble, L. and Manning, T.J., Computational Studies of the Ferric-Bryostatin-1 Complex: A Polarity Adaptive Molecule, Florida Scientist, 71, 341-359 (2008) |
| 15 | Tsybin, Y.O.; Quinn, J.P.; Tsybin, O.Y.; Hendrickson, C.L. and Marshall, A.G., Electron Capture Dissociation Implementation Progress in Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, J. Am. Soc. Mass Spectr., 19 (6), 762-771 (2008) |
| 16 | Wågberg, T.; Hedenström, M.; Talyzin, A.V.; Sethson, I.; Tsybin, Y.O.; Purcell, J.M.; Marshall, A.G.; Noreus, D.; Sato, T. and Johnel, D., Synthesis and Structural Characterization of C70H38, Angew. Chem. Int. Ed., 47, 2796-2799 (2008) |
| 17 | Zhang, H.; Kazazic, S.; Schaub, T.M.; Tipton, J.D.; Emmett, M.R. and Marshall, A.G., Enhanced Digestion Efficiency, Peptide Ionization Efficiency, and Sequence Resolution for Protein Hydrogen/Deuterium Exchange Monitored by Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Anal. Chem., 80 (23), 9034-9041 (2008) |
2007 Publications and Scientific Activities |
| 1 | Groenewold, G.S.; Gianotto, A.K.; Cossel, K.C.; Van Stipdonk, M.J.; Oomens, J.; Polfer, N.; Moore, D.T.; de Jong, W.A. and McIlwain, M.E., Mid-infrared Vibrational Spectra of Discrete Acetone-ligated Cerium Hydroxide Cations, Phys. Chem. Chem. Phys., 9, 596-606 (2007) |
| 2 | He, H.; Conrad, C.; Nilsson, C.L.; Ji, Y.; Schaub, T.; Marshall, A. and Emmett, M., A Novel Method for Lipidomic Analysis: p53 Expression Modulates Sulfatide, Ganglioside and Phospholipid Composition of U87 MG Glioblastoma Cells, Anal. Chem., 79, 8423-8430 (2007) |
| 3 | Hussain, F.; Dickman, M.H.; Kortz, U.; Keita, B.; Nadjo, L.; Khitrov, G.A. and Marshall, A.G., Trimeric, Cyclic Dimethyltin-Containing Tungstophosphate [{(Sn(CH3)2)(Sn(CH3)2O)(A-PW9O34)}3]21-, J. Cluster Science, 18, 173-191 (2007) |
| 4 | Kim, S.; Choi, M.C.; Kim, S.; Hu, M.; Yoo, J.S.; Kim, H.S.; Blakney, G.T.; Hendrickson, C.L. and Marshall, A.G., Modification of Trapping Potential by Inverted Sidekick Electrode Voltage during Detection Extends Time-Domain Signal Duration for Significantly Enhanced Fourier Transform Ion Cyclotron Resonance Mass Resolution, Anal. Chem., 79, 3575-3580 (2007) [read online] |
| 5 | Lovely, C.J.; Chen, Y. and Ekanayake, E.V., Ring closing metathesis reactions of imidazole derivatives, Heterocycles, 74, 873-894 (2007) |
| 6 | Puchades, M.; Nilsson, C.L.; Emmett, M.R.; Aldape, K.D.; Ji, Y.; Lang, F.F.; Liu, T.J. and Conrad, C.A., Proteomic Investigation of Glioblastoma Cell Lines Treated with Wild-Type p53 and Cytotoxic Chemotherapy Demonstrates an Association between Galectin-1 and p53 Expression, J. Proteome Res., 6, 869-875 (2007) |
| 7 | Purcell, J.M.; Juyal, P.; Kim, D.-G.; Rodgers, R.P.; Hendrickson, C.L. and Marshall, A.G., Sulfur Speciation in Petroleum: Atmospheric Pressure Photoionization or Chemical Derivatization and Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Energy & Fuels, 21, 2869-2874 (2007) |
| 8 | Purcell, J.M.; Rodgers, R.P.; Hendrickson, C.L. and Marshall, A.G., Speciation of Nitrogen Containing Aromatics by Atmospheric Pressure Photoionization or Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, J. Am. Soc. Mass Spectr., 18, 1265-1273 (2007) |
| 9 | Renfrow, M.B.; Mackay, C.L.; Chalmers, M.J.; Julian, B.A.; Mestecky, J.; Kilian, M.; Poulsen, K.; Emmett, M.R.; Marshall, A.G. and Novak, J., Analysis of O-glycan heterogeneity in IgA1 myeloma proteins by Fourier transform ion cyclotron resonance mass spectrometry: implications for IgA nephropathy, Anal. Bioanal. Chem., 389, 1397-1407 (2007) |
| 10 | Schaub, T.M.; Jennings, D.W.; Kim, S.; Rodgers, R.P. and Marshall, A.G., Heat Exchanger Deposits in an Inverted Steam Assisted Gravity Drainage Operation. Part 2. Organic Acid Analysis by Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Energy & Fuels, 21, 185-194 (2007) [read online] |
| 11 | Sihlbom, C.; Wilhelmsson, U.; Li, L.; Nilsson, C.L. and Pekny, M., 14-3-3 Expression in Denervated Hippocampus after Entorhinal Cortex Lesion Assessed by Culture-Derived Isotope Tags in Quantitative Proteomics, J. Proteome Res., 6, 3491-3500 (2007) |
| 12 | Smith, D.F.; Schaub, T.M.; Rahimi, P.; Teclemariam, A.; Rodgers, R.P. and Marshall, A.G., Self-Association of Organic Acids in Petroleum and Canadian Bitumen Characterized by Low- and High-Resolution Mass Spectrometry, Energy & Fuels, 21, 1309-1316 (2007) |
| 13 | Stanford, L.A.; Kim, S.; Klein, G.C.; Smith, D.F.; Rodgers, R.P. and Marshall, A.G., Identification of Water-Soluble Heavy Crude Oil Organics. Acidic and Basic NSO Compounds in Fresh Water and Sea Water by Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Environ. Sci. Technol., 41, 2696-2702 (2007) [read online] |
| 14 | Stanford, L.A.; Rodgers, R.P.; Marshall, A.G.; Czarnecki, J. and Wu, X.A., Compositional Characterization of Bitumen/Water Emulsion Films by Negative- and Positive-ion Electrospray Ionization and Field Desorption/Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Energy & Fuels, 21, 973-981 (2007) |
| 15 | Stanford, L.A.; Rodgers, R.P.; Marshall, A.G.; Czarnecki, J.; Wu, X.A. and Taylor, S., Detailed Elemental Compositions of Emulsion Interfacial Material vs. Parent Oil for Nine Geographically Distinct Light, Medium, and Heavy Crude Oils, Detected by Negative- and Positive-Ion Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Energy & Fuels, 21, 963-972 (2007) |
| 16 | Tremblay, L.B.; Dittmar, T.; Marshall, A.G.; Cooper, W.J. and Cooper, W.T, Molecular Characterization of Dissolved Organic Matter in a North Brazilian Mangrove Porewater and Mangrove-Fringed Estuary by Ultrahigh Resolution Fourier Transform-Ion Cyclotron Resonance Mass Spectrometry and Excitation/Emission Spectroscopy, Marine Chemistry, 105, 15-29 (2007) |
| 17 | Tsybin, Y.O.; He, H.; Emmett, M.R.; Hendrickson, C.L. and Marshall, A.G., Ion Activation in Electron Capture Dissociation To Distinguish between N-Terminal and C-Terminal Product Ions, Anal. Chem., 79, 7596-7602 (2007) |
| 18 | Woodling, K.A.; Eyler, J.R.; Tsybin, Y.O.; Nilsson, C.L.; Marshall, A.G.; Edison, A.S.; Al-Naggar, I.M. and Bubb, M.R., Identification of Single and Double Sites of Phosphorylation by ECD FT-ICR/MS in Peptides Related to the Phosphorylation Site Domain of the Myristoylated Alanine-Rich C Kinase Protein, J. Am. Soc. Mass Spectr., 18 (12), 2137-2145 (2007) |
2006 Publications and Scientific Activities |
| 1 | Brandal, O.; Hanneseth, A.-M.D.; Hemmingsen, P.V.; Sjoblom, J.; Kim, S.; Rogers, R.P. and Marshall, A.G., Isolation and Characterization of Naphthenic Acids form a Metal Naphthenate Deposit. Molecular Properties at Oil-Water and Air-Water Interfaces, J. Dispersion Sci. & Technol., 27, 295-305 (2006) [read online] |
| 2 | Carlsohn, E.; Nystrom, J.; Bölin, I.; Svennerholm, A.-M. and Nilsson, C.L., HpaA is essential for Helicobacter pylori colonization in mice, Infect. Immun., 74 (2), 920-926 (2006) |
| 3 | Carlsohn, E.; Nyström, J.; Svennerholm, A.-M. and Nilsson, C.L., Characterization of the outer membrane protein profile of clinical Helicobacter pylori isolates by subcellular fractionation and high sensitivity nano-LC FT-ICR MS/MS analysis, J. Proteome Res., 5 (11), 3197-3204 (2006) |
| 4 | Chalmers, M.J.; Busby, S.A.; Pascal, P.; He, Y.; Hendrickson, C.L.; Marshall, A.G. and Griffin, P.R., Probing Protein Ligand Interactions by Automated Hydrogen/Deuterium Exchange Mass Spectrometry, Anal. Chem., 78, 1005-1014 (2006) [read online] |
| 5 | Dunbar, R.C.; Moore, D.T. and Oomens, J., IR-Spectroscopic Characterization of Acetophenone Complexes with Fe+, Co+, and Ni+ Using Free-Electron-Laser IRMPD, J. Phys. Chem. A, 110, 8316-8326 (2006) |
| 6 | Emmett, M.R.; Kazazic, S.; Marshall, A.G.; Chen, W.; Shi, S.D.-H.; Bolanos, B. and Greig, M.J., Supercritical Fluid Chromatography Reduction of Hydrogen/Deuterium Back Exchange in Solution–Phase Hydrogen/Deuterium Exchange with Mass Spectrometric Analysis, Anal. Chem., 78, 7058 (2006) [read online] |
| 7 | Fu, J.-M.; Kim, S.; Hendrickson, C.L.; Rogers, R.P.; Marshall, A.G. and Qian, K., Nonpolar Compositional Analysis of Vacuum Gas Oil Distillation Fractions by Electron Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Energy & Fuels, 20 (2), 661-667 (2006) [read online] |
| 8 | Fu, J.; Purcell, J.M.; Quinn, J.P.; Schaub, T.M.; Hendrickson, C.L.; Rodgers, R.P. and Marshall, A.G., External electron ionization 7 T Fourier transform ion cyclotron resonance mass spectrometer for resolution and identification of volatile organic mixtures., Rev. Sci. Instrum., 7 (22), 1-9 (2006) |
| 9 | Fu, J.M.; Klein, G.C.; Smith, D.F.; Kim, S.; Rodgers, R.P.; Hendrickson, C.L. and Marshall, A.G., Comprehensive Compositional Analysis of Hydrotreated and Untreated Nitrogen-Concentrated Fractions from Syncrude oil by Electron Ionization, Field Desorption Ionization, and Elecrospray Ionization Ultrahigh-Resolution FT-ICR Mass Spectrometry, Energy & Fuels, 20, 1235-1241 (2006) [read online] |
| 10 | Groenewold, G.S.; Gianotto, A.K.; Cossel, K.C.; Van Stipdonk, M.J.; Moore, D.T., et al., Vibrational Spectroscopy of Mass-Selected [UO2(ligand)n]2+ Complexes in the Gas Phase: Comparison with Theory, J. Am. Chem. Soc., 128, 4802-4813 (2006) |
| 11 | Hemmingsen, P.V.; Kim, S.; Pettersen, H.E.; Rodgers, R.P.; Sjöblom, J. and Marshall, A.G., Structural Characterization and Interfacial Behavior of Acidic Compounds Extracted from a North Sea Oil, Energy & Fuels, 20 (5), 1980-1987 (2006) [read online] |
| 12 | Kim, S.; Rodgers, R.P. and Marshall, A.G., Truly 'exact' Mass: Elemental Composition can be Determined Uniquely from Molecular Mass Measurement at ~0.1 mDa Accuracy for Molecules up to ~500 Da, Int. J. Mass Spectrom., 251 (2-3), 260-265 (2006) [read online] |
| 13 | Klein, G.C.; Ansgtrom, A.; Rodgers, R.P. and Marshall, A.G., Use of Saturates/Aromatics/Resins/Asphaultenes (SARA) Fractionation to Determine Matrix Effects in Crude Oil Analysis by Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Energy & Fuels, 20 (2), 668-672 (2006) [read online] |
| 14 | Klein, G.C.; Kim, S.; Rodgers, R.P.; Marshall, A.G. and Yen, A., Mass Spectral Analysis of Asphaltenes. II. Detailed Compositional Comparison of Asphaltenes Deposit to its Crude Oil Counterpart for Two Geographically Different Crude Oils by Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Energy & Fuels, 20, 1973-1979 (2006) |
| 15 | Klein, G.C.; Kim, S.; Rodgers, R.P.; Marshall, A.G.; Yen, A. and Asomaning, S., Mass Spectral Analysis of Asphaltenes. I. Compositional Differences between Pressure Drop and Solvent Drop Asphaltenes Determined by Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Energy & Fuels, 20, 1965-1972 (2006) [read online] |
| 16 | Klein, G.C.; Rodgers, R.P. and Marshall, A.G., Identification of Hydrotreatment-Resistant Heteroatomic Species in a Crude Oil Distillation Cut by Electrospray Ionization FT-ICR Mass Spectrometry, Fuel, 85, 2071-2080 (2006) |
| 17 | Lisal, J.; Kainov, D.E.; Lam, T.-K.T.; Emmett, M.R.; Wei, H.; Gottlieb, P.; Marshall, A.G. and Tuma, R., Interaction of Packaging Motor with the Polymerase Complex of dsRNA Bacteriophage, Virology, 351, 73-79 (2006) |
| 18 | Manning, T.J., Optimization of Solvent Composition for Extraction of Multi-Polarity Molecules, Separation Science & Technology, 41, 3349-3366 (2006) |
| 19 | Manning, T.J.; Mann, J.D.; Stewart, K.; Asadchev, A.; Jones, J.K.; Zipperer, S.; Turner, R.; Abadi, G. and Dennis, P., Visualization exercises with fullerenes, nanotubes and nanoparticles: From nanogears and quantum computers to protein folding and neutrinos, Chem. Educator, 12, 1-23 (2006) |
| 20 | Manning, T.J.; Rhodes, E.; Land, M.; Parkman, R.; Sumner, B.; Lam, T.K.T.; Marshall, A.G. and Phillips, D., Impact of Environmental Conditions on the Marine Natural Product Bryostatin 1, Natural Product Research, 20 (6), 611-628 (2006) [read online] |
| 21 | Marshall, A.G., Dedication to Robert Boyd, Rapid Commun. Mass Sp., 20, 1486 (2006) |
| 22 | Mullins, O.C.; Rodgers, R.P., Weinheber, P.; Klein, G.C.; Venkatramanan, L.; Andrews, B. and Marshall, A.G., Oil Reservoir Characterization via Crude Oil Analysis by Downhole Fluid Analysis in Oil Wells with Visible-NIR Spectroscopy and by Laboratory Analysis with ESI FT-ICR-Mass Spectroscopy, Energy & Fuels, 20 (6), 2448-2456 (2006) |
| 23 | Nair, S.S.; Nilsson, C.L.; Emmett, M.R.; Schaub, T.M.; Krishnan, K.S.; Balaram, P. and Marshall, A.G., de novo Sequencing and Disulfide Mapping of a Bromotryptophan-Containing Conotoxin by Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Anal. Chem., 78, 0000-0000 (2006) |
| 24 | Nilsson, C.L., Bringing MS and microbiology together, Anal. Chem., 78 (21), 7383 (2006) |
| 25 | Polfer, N.C.; Oomens, J. and Dunbar, R.C., IRMPD Spectroscopy of Metal-ion Tryptophan Complexes, Phys. Chem. Chem. Phys., 8, 2744-2751 (2006) |
| 26 | Polfer, N.C.; Oomens, J.; Moore, D.T.; Von Helden, G.; Meijer, G., et al., Infrared Spectroscopy of Phenylalanine Ag(I) and Zn(II) Complexes in the Gas Phase, J. Am. Chem. Soc., 128, 517-525 (2006) |
| 27 | Polfer, N.C.; Valle, J.J.; Moore, D.T.; Oomens, J.; Eyler, J.R., et al., Differentiation of Isomers by Wavelength-Tunable Infrared Multiple-Photon Dissociation-Mass Spectrometry: Application to Glucose-Containing Disaccharides, Anal. Chem., 78, 670-679 (2006) |
| 28 | Purcell, J.M.; Hendrickson, C.L.; Rodgers, R.P. and Marshall, A.G., Atmospheric Pressure Photoionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry for Complex Mixture Analysis, Anal. Chem., 78, 5906-5912 (2006) |
| 29 | Sadasivan Nair, S.; Romanuka, J.; Billeter, M.; Skjeldal, L.; Emmett, M.R.; Nilsson, C.L. and Marshall, A.G., Structural characterization of an unusually stable cyclic peptide, kalata B2 from Oldenlandia affinis, Biochim. Biophys. Acta, 1764, 1568-1576 (2006) |
| 30 | Stanford, L.A.; Kim, S.; Rodgers, R.P. and Marshall, A.G., Characterization of Compositional Changes in Vacuum Gas Oil Distillation Cuts by Electrospray Ionization FT-ICR Mass Spectrometry, Energy & Fuels, 20, 1664-1673 (2006) |
| 31 | Szczepanski, J.; Wang, H.; Vala, M.; Tielens, A.G.G.M.; Eyler, J., et al., Infrared Spectroscopy of Gas-phase Complexes of Fe+ and Polycyclic Aromatic Hydrocarbon Molecules, Astrophysical J., 646, 666-680 (2006) |
| 32 | Talyzin, A.V.; Dzeilewski, A.; Sundqvist, B.; Tsybin, Y.O.; Purcell, J.M.; Marshall, A.G.; Shulga, Y.; McCammon, C. and Dubrovinsky, L., Hydrogenation of C60 at 2 GPa Pressure and High Temperature, J. Chem. Phys., 325, 445-451 (2006) |
| 33 | Talyzin, A.V.; Tsybin, Y.O.; Purcell, J.M.; Schaub, T.M.; Shulga, Y.M.; Noreus, D.; Sato, T.; Dzwilewski, A.; Sundqvist, B. and Marshall, A.G., Reaction of Hydrogen Gas with C60 at Elevated Pressure and Temperature: Hydrogenation and Cage Fragmentation, J. Phys. Chem. A, 110, 8528-8534 (2006) |
| 34 | Tsybin, Y.O.; Haselmann, K.F.; Emmett, M.R.; Hendrickson, C.L. and Marshall, A.G., Charge Location Directs Electron Capture Dissociation of Peptide Dications, J. Am. Soc. Mass Spectr., 17, 0000-0000 (2006) |
| 35 | Tsybin, Y.O.; Hendrickson, C.L.; Beu, S.C. and Marshall, A.G., Impact of Ion Magnetron Motion on Electron Capture Dissociation Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Int. J. Mass Spectrom., 256, 144-149 (2006) |
2005 Publications and Scientific Activities |
| 1 | Abbott, K.L.; Renfrow, M.B.; Chalmers, M.J.; Nguyen, B.D.; Marshall, A.G.; Legault, P. and Omichinski, J.G., Enhanced Binding of RNAP II CTD Phosphatase FCP1 to RAP74 Following CK2 Phosphorylation, Biochemistry, 44 (8), 2732-2745 (2005) [read online] |
| 2 | Chalmers, M.J.; Mackay, C.L.; Hendrickson, C.L.; Wittke, S.; Walden, M.; Mischak, H.; Fliser, D.; Just, I. and Marshall, A.G., Combined Top-Down and Bottom-Up Mass Spectrometric Approach to Characterization of Biomarkers for Renal Disease, Anal. Chem., 77, 7163-7171 (2005) |
| 3 | Cooper, H.J.; Hakansson, K. and Marshall, A.G., The Role of Electron Capture Dissociation in Biomolecular Analysis, Mass Spectr. Reviews, 24 (2), 201-222 (2005) [read online] |
| 4 | Dunbar, R.C.; Moore, D. T.; Oomens, J.; Eyler, J. R.; von Helden, G.; Meijer, G., et al., Infrared Spectroscopy of Gas-Phase Cr+ Coordination Complexes: Determination of Binding Sites and Electronic States, J. Am. Chem. Soc., 127, 7243-7254 (2005) |
| 5 | Kim, S.; Standford, L.A.; Rodgers, R.P.; Marshall, A.G.; Walters, C.C.; Qian, K.; Wenger, L.M. and Mankiewicz, P., Microbial Alteration of the Acidic and Neutral Polar NSO Compounds in Petroleum Revealed by Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Organic Geochemistry, 36, 1117-1134 (2005) |
| 6 | Lisal, J.; Lam, T.-K.T.; Kainov, D.E.; Emmett, M.R.; Marshall, A.G. and Tuma, R., Functional Visualization of a Viral Molecular Motor by Hydrogen-Deuterium Exchange Reveals Transient States During RNA Packaging, Nature Struct. Mol. Biol., 12 (5), 460-466 (2005) [read online] |
| 7 | Manning, T.J.; Land, M.; Rhodes, E.; Rudloe, J.; Phillips, D.; Lam, T.-K.T.; Purcell, J.; Cooper, H.J.; Emmett, M.R. and Marshall, A.G., The Role of Extractions and Analysis in Identifying Bryostatins and Potential Precursors from the Bryozoan Bugula neritina, Natural Product Research, 19, 467-491 (2005) |
| 8 | Manning, T.J.; Land, M.; Rhodes, E.; Rudloe, J.; Phillips, D.; Lam, T.K.; Purcell, J.; Cooper, H.J.; Emmett, M. R. and Marshall, A.G., The Role of Extractions and Analysis in Identifying Bryostatins and Potential Percursors from the Bryozoan Bugula neritina, Natural Product Research, 19 (5), 467-491 (2005) [read online] |
| 9 | Mazurek, U.; Geller, O.; Lifshitz, C.; McFarland, M.A.; Marshall, A.G. and Reuben, B.G., The Protonated Serine Octamer Cluster: Structure Elucidation by Gas - Phase H / D Exchange Reactions, J. Phys. Chem. A, 109 (10), 2107-2112 (2005) [read online] |
| 10 | McFarland, M.A.; Chalmers, M.J.; Quinn, J.P.; Hendrickson, C.L. and Marshall, A.G., Evaluation and Optimization of Electron Capture Dissociation Efficiency in Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, J. Am. Soc. Mass Spectr., 16 (7), 1060-1066 (2005) [read online] |
| 11 | McFarland, M.A.; Hendrickson, C.L.; Marshall, A.G.; Fredman, P.; Mansson, J.E. and Nilsson, C.L., Structural Charactization of the GM1 Ganglioside by Infrared Multiphoton Dissociation, Electron Capture Dissociation, and Electron Detachment Dissociation., J. Am. Soc. Mass Spectr., 16 (5), 752-762 (2005) [read online] |
| 12 | Nilsson, C.L., High resolution mass spectrometric approaches to glycoprotein characterization. In: Proteomics and Peptidomics-Technology Developments Driving Biology, G. Marko-Varga, Ed., Comprehensive Analytical Chemistry, 46, 411-428 (2005) |
| 13 | Oomens, J.; Polfer, N.; Moore, D.T.; Marshall, A.G.; Eyler, J.R.; Meijer, G. and von Helden, G., Charge-State Resolved Mid-Infrared Spectroscopy of a Gas-Phase Protein, Phys. Chem. Chem. Phys., 7 (7), 1345-1348 (2005) [read online] |
| 14 | Polfer, N.C.; Oomens, J.; Suhai, S. and Paizs, B., Spectroscopic and Theoretical Evidence for Oxazolone Ring Formation in Collision-Induced Dissociation of Peptides, J. Am. Chem. Soc., 127, 8571-8579 (2005) |
| 15 | Polfer, N.C.; Paizs, B.; Snoek, L.C.; Compagnon, I.; Suhai, S., et al., Infrared Fingerprint Spectroscopy and Theoretical Studies of Potassium Ion Tagged Amino Acids and Peptides in the Gas Phase, J. Am. Chem. Soc., 127, 17154-17155 (2005) |
| 16 | Renfrow, M.B.; Cooper, H.J.; Tomana, M.; Kulhavy, R.; Hiki, Y.; Toma, K.; Emmett, M.R.; Mestecky, J.; Marshall, A.G. and Novak, J., Determination of Aberrant O-Glycosylation in the IgA1 Hinge Region by Electron Capture Dissociation Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, J. Biol. Chem., 280 (19), 19136-19145 (2005) [read online] |
| 17 | Rodgers, R.P.; Schaub, T.M. and Marshall, A.G., Petroleomics: Mass Spectrometry Returns To Its Roots, Anal. Chem., 77 (1), 20-27 (2005) [read online] |
| 18 | Schaub, T.M.; Hendrickson, C.L.; Quinn, J.P.; Rodgers, R.P. and Marshall, A.G., Instrumentation and Method for Ultrahigh Resolution Field Desorption Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry of Non-Polar Species, Anal. Chem., 77 (5), 1317-1324 (2005) [read online] |
| 19 | Schaub, T.M.; Rodgers, R.P.; Marshall, A.G.; Qian, K.; Green, L.A. and Olmstead, W.N., Speciation of Aromatic Compounds in Petroleum Refinery Streams by Continous Flow Field Desorption Ionization FT-ICR Mass Spectrometry, Energy & Fuels, 19, 1566-1573 (2005) |
| 20 | Sihlbom, C.; Davidsson, P. and Nilsson, C.L., Enrichment of human glycoproteins prior to structural determination with ion trap dissociation in Fourier transform ion cyclotron resonance mass spectrometry, J. Proteome Res., 4 (6), 2294-2301 (2005) |
| 21 | Sleno, L.; Volmer, D.A. and Marshall, A.G., Assigning Product Ions from Complex MS / MS Spectra: The Importance of Mass Uncertainty and Resolving Power, J. Am. Soc. Mass Spectr., 16 (2), 183-198 (2005) [read online] |
| 22 | Talyzin, A.V.; Tsybin, Y.O.; Peera, A.A.; Schaub, T.M.; Marshall, A.G.; Sundqvist, B.; Mauron, P.; Zuttel, A. and Billups, W.E., Synthesis of C59Hx and C58Hx Fullerenes Stabilized by Hydrogen, J. Phys. Chem. B, 109 (12), 5403-5405 (2005) [read online] |
| 23 | Talyzin, A.V.; Tsybin, Y.O.; Schaub, T.M.; Mauron, P.; Shul'ga, Y.M.; Zuttel, A.; Sundqvist, B. and Marshall, A.G., Composition of Hydrofullerene Mixtures Produced by C60 Reaction with Hydrogen Gas Revealed by High Resolution Mass Spectrometry, J. Phys. Chem. B, 109, 12742-12747 (2005) |
| 24 | Valle, J.J.; Oomens, J.; Moore, D.T.; von Helden, G.; Hendrickson, C.L.; Blakney, B.T.; van der Meer, A.F.G.; Meijer, G.; Marshall, A.G. and Eyler, J.R., A Free Electron Laser-Fourier Transform Ion Cyclotron Resonance Mass Spectrometry Facility for Obtaining Infrared Multiphoton Dissociation Spectra of Gaseous Ions, Rev. Sci. Instrum., 76 (2), 23103 (2005) [read online] |
| 25 | Wagberg, T.; Johnels, D.; Peera, A.; Hedenstrom, M.; Schulga, Y.M.; Tsybin, Y.O..; Purcell, J.M..; Marshall, A.G..; Noreus, D.; Sato, T. and Talyzin, A.V., Selective synthesis of the C3v isomer of C60H18, Organic Letters, 7 (25), 5557-5560 (2005) |
| 26 | Wu, Y.; Rodgers, R.P. and Marshall, A.G., ESI FT-ICR Mass Spectral Analysis of Coal Liquefaction Products, Fuel, 84 (14-15), 1790-1797 (2005) |
| 27 | Wu, Z.; Strohm, J.J.; Song, C.; Rodgers, R.P.; Marshall, A.G. and Tuma, R., Comparative Compositional Analysis of Untreated and Hydrotreated Oil by Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Energy & Fuels, 19 (3), 1072-1077 (2005) [read online] |
| 28 | Yanofsky, C.M.; Bell, A.W.; Lesimple, S.; Morales, F.; Lam, T.K.; Blakney, G.T.; Marshall, A.G.; Carrillo, B.; Lekpor, K.; Boismenu, D. and Kerney, R.E., Multicomponent Internal Recalibration of an LC-FTICR-MS Analysis Employing a Partially Characterized Complex Peptide Mixture: Systematic and Random Errors, Anal. Chem., 77 (22), 7246-8254 (2005) [read online] |
2004 Publications and Scientific Activities |
| 1 | Beu, S.C.; Blakney, G.T.; Quinn, J.P.; Hendrickson, C.L. and Marshall, A.G., Broadband Phase Correction of FT-ICR Mass Spectra via Simultaneous Excitation and Detection, Anal. Chem., 76 (19), 5756-5761 (2004) [read online] |
| 2 | Bossio, R.E.; Hoffman, N.W.; Cundari, T.R. and Marshall, A.G., Gas Phase Ligand Exchange in Square Planar Rh(I) Complex Proceeds by Dissociative Exchange: Electrospray Ionization FT-ICR MS and DFT Evidence, Organometallics, 23, 144-148 (2004) [read online] |
| 3 | Cage, B.; Friedrich, J.; Little, R.B.; Wang, Y.-S.; McFarland, M.A.; Hendrickson, C.L.; Dalal, N.S. and Marshall, A.G., Wavelength Resolved Laser-Induced Fluorescence Emission of C6F3H3+ Trapped in an Ion Cyclotron Resonance Cell, Chem. Phys. Lett., 394 (1-3), 188-193 (2004) [read online] |
| 4 | Carlsohn, E.; Angstrom, J.; Emmett, M.R.; Marshall, A.G. and Nilsson, C.L., Chemical Cross-Linking of the Urease Complex from Helicobacter pylori and Analysis by Fourier Transform Ion Cyclotron Resonance Mass Spectrometry and Molecular Modeling, Int. J. Mass Spectrom., 234, 137-144 (2004) [read online] |
| 5 | Carlsohn, E.; Anstrom, J.; Emmett, M.R.; Marshall, A.G. and Nilsson, C.L., Chemical Cross-Linking of Ureas Complex From Helicobacter pylori and Analysis by Fourier Transform Ion Cyclotron Resonance Mass Spectrometry and Molecullar Modeling, Int. J. Mass Spectrom., 234, 137-144 (2004) |
| 6 | Chalmers, M.J.; Hakansson, K.; Johnson, R.; Smith, R.; Shen, J.; Emmett, M.R. and Marshall, A.G., Protein kinase A phosphorylation characterized by tandem Fourier transform ion cyclotron resonance mass spectrometry, Proteomics, 4 (4), 970-981 (2004) [read online] |
| 7 | Chalmers, M.J.; Kolch, W.; Emmett, M.R.; Marshall, A.G. and Mischak, H., Identification and analysis of phosphopeptides, J. Chromatography B, 803, 111-120 (2004) [read online] |
| 8 | Cooper, H.J.; Heath, J.K.; Jaffray, E.; Hay, R.T.; Lam, T.-K. and Marshall, A.G., Identification of Sites of Ubiquitination in Proteins: A Fourier Transform Ion Cyclotron Resonance Mass Spectrometry Approach., Anal. Chem., 76 (23), 6982-6988 (2004) [read online] |
| 9 | Cooper, H.J.; Hudgins, R.R. and Marshall, A.G., Electron Capture Dissociation Fourier Transform Ion Cyclotron Resonance Mass Spectrometry of Cyclodepsipeptides, Branched Peptides and e-Peptides, Int. J. Mass Spectrom., 234, 23-35 (2004) [read online] |
| 10 | Davidsson, P.; Emmett, M.R.; Marshall, A.G. and Nilsson, C.L., Glycoproteomics of Cerebrospinal Fluid in Neurodegenerative Disease, Carina Silbom, Int. J. Mass Spectrom., 234, 145-152 (2004) |
| 11 | Friedrich, J.; Wang, Y.-S.; Fu, J.; Hendrickson, C.L. and Marshall, A.G., Time Resolved Laser-Induced Fluorescence of Electrosprayed Ions Confined in a Linear Quadrupole Trap., Rev. Sci. Instrum., 75 (11), 4511-4515 (2004) [read online] |
| 12 | He, F.; Emmett, M.R.; Hakansson, K.; Hendrickson, C.L. and Marshall, A.G., Theoretical and Experimental Prospects for Protein Identification Based Solely on Accurate Mass Measurement, J. Proteome Res., 3 (1), 61-67 (2004) [read online] |
| 13 | Hughey, C.A.; Rodgers, R.P.; Marshall, A.G.; Qian, K.; Walters, C.C. and Mankiewicz, P., Acidic and Neutral Polar NSO Compounds in Smackover Oils of Different Thermal Maturity Revealed by Electrospray High Field, Organic Geochemistry, 35 (7), 863-880 (2004) [read online] |
| 14 | Kolch, W.; Mischak, H.; Chalmers, M.J.; Pitt, A. and Marshall, A.G., Clinical Proteomics: A Question of Technology., Rapid Commun. Mass Sp., 18, 2365-2366 (2004) [read online] |
| 15 | Kujawinski, E.B.; Del Vecchio, R.; Blough, N.V.; Klein, G.C. and Marshall, A.G., Probing Molecular-Level Transformations of Dissolved Organic Matter: Insights on Photochemical Degradation and Protozoan Modification of DOM from Electrospray Ionization Fourier-Transform Ion Cyclotr, Marine Chemistry, 92, 23-37 (2004) [read online] |
| 16 | Lanman, J.; Lam, T.-K.T.; Emmett, M.R.; Marshall, A.G.; Sakalian, M. and Prevelige, P.E., Jr., Key Interactions in HIV-1 Maturation Identified by Mass Spectrometry Based H/D Exchange, Nature Struct. Mol. Biol., 11 (7), 676-677 (2004) [read online] |
| 17 | Marshall, A.G. and Rodgers, R.P., Petroleomics: The Next Grand Challenge for Chemical Analysis, Accounts of Chemical Research, 37 (1), 53-59 (2004) [read online] |
| 18 | Marshall, A.G., Accurate Mass Measurement: Taking Full Advantage of Nature's Isotopic Complexity, Physica B, 346-347, 503-508 (2004) [read online] |
| 19 | Mazurek, U.; McFarland, M.A.; Marshall, A.G. and Lifshitz, C., Isolation of Isomers Based on Hydrogen/Deuterium Exchange in the Gas Phase, Eur. J. Mass Spectrometry, 10, 755-758 (2004) |
| 20 | McFarland, M.A.; Hendrickson, C.L. and Marshall, A.G., Ion "Threshing": Collisionally-Activated Dissociation in an External Octopole Ion Trap by Oscillation of an Axial Electric Potential Gradient, Anal. Chem., 76 (6), 1545-1549 (2004) [read online] |
| 21 | Medzihradszky, K.F.; Zhang, X.; Chalkley, R.J.; Guan, S.; McFarland, M.A.; Chalmers, M.J.; Marshall, A.G.; Diaz, R.L.; Allis, C.D. and Burllingame, A.L., Characterization of Tetrahymena Histone H2B Variants and Posttranslational Populations by Electron Capture Dissociation (ECD) Fourier Transform Ion Cyclotron Resonance Mass Spectrometry (FT-ICR MS)., Molecular & Cellular Proteomics, 3 (9), 872-886 (2004) [read online] |
| 22 | Mehndiratta, P.; Walton, W.J.; Hare, J.T.; Pulido, S.; Parthasarathy, G.; Emmett, M.R.; Marshall, A.G. and Logan, T.A., Expression, Purification, and Characterization of Avian Thy-1 from Lec1 Mammalian and Tn5 Insect Cells, Protein Expression and Purification, 33, 274-287 (2004) [read online] |
| 23 | Moore, D. T.; Oomens, J.; Eyler, J. R.; Meijer, G.; von Helden, G. and et al., Gas-Phase IR Spectroscopy of Anionic Iron Carbonyl Clusters, J. Am. Chem. Soc., 126, 14726-14727 (2004) |
| 24 | Moore, D.T.; Oomens, J.; van der Meer, L.; von Helden, G.; Meijer, G.; Valle, J.; Marshall, A.G. and Eyler, J.R., Probing the Vibrations of Shared, OH+O-Bound Protons in the Gas Phase, Chem. Phys. Chem., 5 (5), 740-743 (2004) [read online] |
| 25 | Oomens, J.; Moore, D. T.; von Helden, G.; Meijer, G. and Dunbar, R. C., The Site of Cr+ Attachment to Gas-Phase Aniline from Infrared Spectroscopy, J. Am. Chem. Soc., 126, 724-725 (2004) |
| 26 | Patrie, S.M.; Charlebois, J.P.; Quinn, J.P.; Whipple, D.; Mukhopadhyay, B.; Marshall, A.G.; Hendrickson, C.L. and Kelleher, N.L., Construction of a Hybrid Quadrupole/Fourier Transform Ion Cyclotron Resonance Mass Spectrometer for Versatile MS/MS Above 10 kDa, J. Am. Soc. Mass Spectr., 15 (7), 1099-1108 (2004) [read online] |
| 27 | Paulson, L.; Martin, P.; Nilsson, C.L.; Ljung, E.; Westman-Brinkmalm, A.; Blennow, K. and Davidsson, P., Comparative proteome analysis of thalamus in MK-801 treated rats, Proteomics, 4 (3), 819-825 (2004) |
| 28 | Renfrow, M.B.; Naryshkin, N.; Lewis, L.M.; Chen, H.-T.; Ebright, R.H. and Scott, R.A., Transcription Factor B Contacts Promoter DNA Near the Transcription Start Site of the Archaeal Transcription Initiation Complex, J. Biol. Chem., 279 (4), 2825-2831 (2004) [read online] |
| 29 | Savitski, M.M.; Ivonin, I.A.; Nielsen, M.L.; Zubarev, R.A.; Tsybin, Y.O. and Hakansson, P., Shifted-basis technique improves accuracy of peak position determination in Fourier transform mass spectrometry, J. Am. Soc. Mass Spectr., 15 (4), 457-461 (2004) [read online] |
| 30 | Schafer, M.; Schmuck, C.; Geiger, L.; Chalmers, M.J.; Hendrickson, C.L. and Marshall, A.G., Structurally Related Non-Covalent Complexes Examined by Quadrupole Ion Trap (QIT) MS2 and Infrared Multiphoton Dissociation Fourier Transform Ion Cyclotron Resonance Mass Spectrometry IRMPD-FT-ICR MS:, Int. J. Mass Spectrom., 237 (1), 33-45 (2004) [read online] |
| 31 | Schaub, T.M.; Linden, H.B.; Hendrickson, C.L. and Marshall, A.G., Continuous Flow Sample Introduction for Field Desorption/Ionization Mass Spectrometry, Rapid Commun. Mass Sp., 18 (14), 1641-1644 (2004) [read online] |
| 32 | Sihlbom, C.; Davidsson, P.; Emmett, M.R.; Marshall, A.G. and Nilsson, C.L., Glycoproteomics of Cerebrospinal Fluid in Neurodegenerative Disease, Int. J. Mass Spectrom., 234 (1-3), 145-152 (2004) [read online] |
| 33 | Tsybin, Y.O.; Ramstrom, M.; Witt, M.; Baykut, G. and Hakansson, P., Peptide and protein characterization by high-rate electron capture dissociation Fourier transform ion cyclotron resonance mass spectrometry, J. Mass Spectrometry, 39 (7), 719-729 (2004) [read online] |
| 34 | Tsybin, Y.O.; Witt, M.; Baykut, G. and Hakansson, P., Electron capture dissociation Fourier transform ion cyclotron resonance mass spectrometry in the electron energy range 0-50 eV, Rapid Commun. Mass Sp., 18 (14), 1607-1613 (2004) [read online] |
| 35 | Wu, Z.; Rodgers, R.P. and Marshall, A.G., Characterization of Vegetable Oils: Detailed Compositional Fingerprints Derived from Electrospray Ionization Fourier Transform Ion Clyclotron Resonance Mass Spectrometry., J. Agricultural and Food Chemistry, 52 (17), 5322-5328 (2004) [read online] |
| 36 | Wu, Z.; Rodgers, R.P. and Marshall, A.G., Compositional Determination of Acidic Species in Illinois #6 Coal Extracts by Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry., Energy & Fuels, 18 (5), 1424-1428 (2004) [read online] |
| 37 | Wu, Z.; Rodgers, R.P. and Marshall, A.G., Two and Three Dimensional van Krevelen Diagrams: A Graphical Analysis Complementary to the Kendrick Mass Plot for Sorting Elemental Compositions of Complex Organic Mixtures Based on Ultrahigh-Resolut, Anal. Chem., 76 (9), 2511-2516 (2004) [read online] |
| 38 | Xiong, Y.; Schroeder, K.; Greenbaum, N.L.; Hendrickson, C.L. and Marshall, A.G., Improved Mass Analysis of Oligoribonucleotides by 13C, 15N Double Depletion and Electrospray Ionization FT-ICR Mass Spectrometry, Anal. Chem., 76 (6), 1804-1809 (2004) [read online] |
2003 Publications and Scientific Activities |
| 1 | Bossio, R.E.; Hudgins, R.R. and Marshall, A.G., Gas-Phase Photochemistry Can Distinguish Difference Conformations of Unhydrated Photoaffinity-Labeled Peptide Ions, J. Phys. Chem. B, 107, 3284-3289 (2003) [read online] |
| 2 | Chalmers, M.J.; Quinn, J.P.; Blakney, G.T.; Emmett, M.R.; Mischak, H.; Gaskell, S.J. and Marshall, A.G, Liquid chromatography - Fourier transform ion cyclotron resonance mass spectrometric characterization of protein kinase C phosphorylation, J. Proteome Res., 2 (4), 373-382 (2003) [read online] |
| 3 | Cooper, H.J.; Case, M.A.; McLendon, G.L. and Marshall, A.G., Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometric Analysis of Metal-Ion Selected Dynamic Protein Libraries, J. Am. Chem. Soc., 125, 5331-5339 (2003) [read online] |
| 4 | Cooper, H.J.; Hakansson, K.; Marshall, A.G.; Hudgins, R.P.; Haselmann, K.F.; Kjeldsen, F.; Budnik, B.A.; Polfer, N.C. and Zubarev, R.A., The Diagnostic Value of Amino Acid Side-Chain Losses in Electron Capture Dissociation of Polypeptides, Eur. J. Mass Spectrometry, 9, 221-222 (2003) |
| 5 | Cooper, H.J.; Hudgins, R.R.; Hakansson, K. and Marshall, A.G., Secondary Fragmentation of Linear Peptides in Electron Capture Dissociation, Int. J. Mass Spectrom., 228, 723-728 (2003) |
| 6 | Emmett, M.R., Determination of post-translational modification of proteins by high-sensitivity, high-resolution Fourier transform ion cyclotron resonance mass spectrometry, J. Chromatography A, 1013 (1-2), 203-213 (2003) [read online] |
| 7 | Emmett, M.R., Determination of post-translational modifications of proteins by high-sensitivity, high-resolution Fourier transform ion cyclotron resonance mass spectrometry, Proteomics Select - The Virtual Journal of Proteomics, 2 (20), 3-13 (2003) [read online] |
| 8 | Fagerquist, C.K.; Hudgins, R.R.; Emmett, M.R.; Hakansson, K. and Marshall, A.G., An Antibiotic Linked to Peptides and Proteins is Released by Electron Capture Dissociation Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, J. Am. Soc. Mass Spectr., 14, 302-310 (2003) |
| 9 | Giunta, P.R.; Bossio, R.E.; Stiegman, A.E. and Marshall, A.G., Photochemically Generated Polyacrylonitrile-Silica Nanocomposites: Optimized Fabrication and Characterization, Chem. Mater., 15, 1289-1295 (2003) |
| 10 | Hakansson, K.; Emmett, M.R.; Marshall, A.G.; Davidsson, P. and Nilsson, C.L., Structural Analysis of 2D-Gel-Separated Glycoproteins from Human Cerebrospinal Fluid by Tandem High Resolution Mass Spectrometry, J. Proteome Res., 2, 581-588 (2003) |
| 11 | Hakansson, K.; Hudgins, R.R.; Marshall, A.G. and O'Hair, R.A.J., Electron Capture Dissociation and Infrared Multiphoton Dissociation of Oligodeoxynucleotide Dications, J. Am. Soc. Mass Spectr., 14, 23-41 (2003) |
| 12 | Hurd, T.W.; Fan, S.; Liu, C-J.; Kweon, H.K.; Hakansson, K. and Margolis, B., Phosphorylation-Dependent Binding of 14-3-3 to the Polarity Protein Par3 Regulates Cell Polarity in Mammalian Epithelia, Current Biology, 13, 2082-2090 (2003) |
| 13 | Håkansson, K.; Chalmers, M.J.; Quinn, J.P.; McFarland, M.A.; Hendrickson, C.L. and Marshall, A.G., Combined electron capture and infrared multiphoton dissociation for multistage MS/MS in an FT-ICR mass spectrometer, Anal. Chem., 75 (13), 3256-3262 (2003) [read online] |
| 14 | Lanman, J.; Lam, T.T.; Barnes, S.; Sakalian, M.; Emmett, M.R.; Marshall, A.G. and Prevelige, P.E., Identification of novel interactions in HIV-1 capsid protein assembly by high-resolution mass spectrometry, J. Mol. Biol., 325 (4), 759-772 (2003) [read online] |
| 15 | Lanman, J.; Lam, T.T.; Sakalian, M.; Emmett, M.R.; Marshall, A.G. and Prevelige, P.E., The Use of Mass Spectrometry and Hydrogen/Deuterium Exchange to Study Viral Particles, Biophysical J., 84 (2) (Part 2, Suppl. S), 362 (2003) |
| 16 | Marshall, A.G., Accurate Mass Measurement: A High -Field Magnet Takes Full Analytical Advantage of Nature's Isotopic Complexity, Eur. Biopharmaceutical Review, Summer, 74-76 (2003) |
| 17 | Nilsson, C.L., Lectins: Proteins that interpret the sugar code (Cover feature), Anal. Chem., 75 (15), 348-353 (2003) |
| 18 | Paulson, L.; Martin, P.; Persson, A.; Nilsson, C.L.; Ljung, E.; Westman-Brinkmalm, A.; Eriksson, P.; Blennow, K. and Davidsson, P., Comparative genome- and proteome analysis of cortex from MK-801 treated rats: an animal model for schizophrenia, J. Neurosci. Res., 71 (4), 526-533 (2003) |
| 19 | Puchades, M.; Folkesson, S.; Nilsson, C.L.; Andreasen, N.; Blennow, K. and Davidsson, P., Proteomic studies of potential cerebrospinal fluid protein markers for Alzheimer's disease, Mol. Brain Res., 118, 140-146 (2003) |
| 20 | Reuben, B.G.; Ritov, Y.; Geller, O.; McFarland, M.A.; Marshall, A.G. and Lifshitz, C., Applying a New Algorithm for Obtaining Site Specific Rate Constants for H/D Exchange of the Gas Phase Proton-Bound Arginine Dimer, Chem. Phys. Lett., 380, 88-94 (2003) |
| 21 | Schafer, M.; Schmuck, C.; Heil, M.; Cooper, H.J.; Hendrickson, C.L.; Chalmers, M.J. and Marshall, A.G., Determination of the Activation Energy for Unimolecular Dissociation of a Non-Covalent Gas-Phase Peptide: Substrate Complex by Infrared Multiphoton Dissociation Fourier Transform Ion Cyclotron Resonan, J. Am. Soc. Mass Spectr., 14, 1282-1289 (2003) |
| 22 | Schaub, T.M.; Hendrickson, C.L.; Qian, K.; Quinn, J.P. and Marshall, A.G., High-Resolution Field Desorption Ionization Fourier Transform Ion Cyclotron Resonance High-Resolution Mass Analysis of Non-Polar Molecules, Anal. Chem., 75, 2172-2176 (2003) [read online] |
| 23 | Stenson, A.C.; Marshall, A.G. and Cooper, W.T., Exact Masses and Chemical Formulas of Individual Suwannee River Fulvic Acids from Ultrahigh Resolution Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Anal. Chem., 75 (6), 1275-1284 (2003) [read online] |
| 24 | Verdier-Pinark, P.; Wang, F.; Burd, B.; Angeletti, R.H.; Horwitz, S.B. and Orr, G.A., Direct Analysis of Tubulin Expression in Cancer Cell Lines by Electrospray Ionization Mass Spectrometry, Biochemistry, 42, 12019-12027 (2003) |
| 25 | Wu, Z.; Jernstrom, S.; Hughey, C.A.; Rodgers, R.P. and Marshall, A.G., Resolution of 10,000 Compositionally Distinct Components in Polar Coal Extracts by Negative-Ion Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Energy & Fuels, 17, 946-953 (2003) |
2002 Publications and Scientific Activities |
| 1 | Bossio, R.E. and Marshall, A.G., Baseline Resolution of Isobaric Phosphorylated and Sulfated Peptides and Nucleotides by Electrospray Ionization FT-ICR Mass Spectrometry: Another Step toward Mass Spectrometry-Based Proteomics, Anal. Chem., 74 (7), 1674-1679 (2002) [read online] |
| 2 | Cooper, H.J.; Hudgins, R.R.; Hakansson, K. and Marshall, A.G., Characterization of Amino Acid Side Chain Losses in Electron Capture Dissociation, J. Am. Soc. Mass Spectr., 13 (3), 241-249 (2002) [read online] |
| 3 | Hughey, C.A.; Rodgers, R.P. and Marshall, A.G., Resolution of 11,000 Compositionally Distinct Components in a Single Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrum of Crude Oil, Anal. Chem., 74 (16), 4145-4149 (2002) [read online] |
| 4 | Hughey, C.A.; Rodgers, R.P.; Marshall, A.G.; Qian, K. and Robbins, W.R., Identification of Acidic NSO Compounds in Crude Oils of Different Geochemical Origins by Negative Ion Electrospray Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Organic Geochemistry, 33 (7), 743-759 (2002) [read online] |
| 5 | Lam, T.T.; Lanman, J.K.; Emmett, M.R.; Hendrickson, C.L.; Marshall, A.G. and Prevelige, P.E., Mapping of protein : protein contact surfaces by hydrogen/deuterium exchange, followed by on-line high-performance liquid chromatography-electrospray ionization Fourier-transform ion-cyclotron-resonan, J. Chromatography A, 982 (1), 85-95 (2002) [read online] |
| 6 | Llewelyn, J.M.; Landing, W.M.; Marshall, A.G. and Cooper, W.T., Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry of Dissolved Organic Phosphorus Species in a Treatment Wetland after Selective Isolation and Concentration, Anal. Chem., 74 (3), 600-606 (2002) [read online] |
| 7 | Marshall, A.G. and Hendrickson, C.L., Fourier Transform Ion Cyclotron Resonance Detection: Principles and Experimental Configurations, Int. J. Mass Spectrom., 215 (1-3), 59-75 (2002) [read online] |
| 8 | Marshall, A.G.; Hendrickson, C.L. and Shi, S.D.-H., Scaling MS Plateaus with High-Resolution FT-ICRMS, Anal. Chem., 74 (9), 252-259 (2002) [read online] |
| 9 | Nilsson, C.L.; Cooper, H.J.; Hakansson, K.; Marshall, A.G.; Ostberg, Y.; Lavrinovicha, M. and Bergstrom, S., Characterization of the P13 Membrane Protein of Borrelia Burgdorferi by Mass Spectrometry, J. Am. Soc. Mass Spectr., 13 (4), 295-299 (2002) [read online] |
| 10 | Schenning, A.P.H.J.; Kilbinger, A.F.M.; Biscarini, F.; Cavallini, M.; Cooper, H.J.; Derrick, P.J.; Feast, W.J.; Lazzaroni, R.; Leclere, Ph.; McDonnell, L.A.; Meijer, E.W. and Meskers, S.C.J., Supramolecular organization of alpha,alpha'-disubstituted sexithiophenes, J. Am. Chem. Soc., 124 (7), 1269-1275 (2002) [read online] |
| 11 | Stenson, A.C.; Landing, W.M.; Marshall, A.G. and Cooper, W.T., Ionization and Fragmentation of Humic Substances in Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Anal. Chem., 74 (17), 4397-4409 (2002) [read online] |
| 12 | Svensson, C.; Teneberg, S.; Nilsson, C.L.; Schwarz, F.P.; Kjellberg, A.; Sharon, N. and Krengel, U., High resolution crystal structures of Erythrina cristagalli lectin in complex with lactose and 2'-fucosyllactose and correlation with thermodynamic data, J. Mol. Biol., 321 (1), 69-83 (2002) |
| 13 | Wigger, M.; Eyler, J.R.; Benner, S.A.; Li, W. and Marshall, A.G., Fourier transform-ion cyclotron resonance mass spectrometric resolution, identification, and screening of non-covalent complexes of Hck Src homology 2 domain receptor and ligands from a 324-member pep, J. Am. Soc. Mass Spectr., 13 (10), 1162-1169 (2002) [read online] |
| 14 | Wu, Z.; Hendrickson, C.L.; Rodgers, R.P. and Marshall, A.G., Compositional Analysis of Military Explosives by Electrospray Ionization Fourier Transform Negative Ion Cyclotron Resonance Mass Spectrometry, Anal. Chem., 74 (8), 1879-1883 (2002) [read online] |
2001 Publications and Scientific Activities |
| 1 | Bossio, R.E.; Callahan, S.D.; Stiegman, A.E. and Marshall, A.G., Complexation and Molecular Speciation in the Silica Sol-Gel Process Characterized by Electrospray Ionization Fourier Transform Ion-Cyclotron Resonance Mass Spectrometry, Chem. Mater., 13, 2097-2102 (2001) |
| 2 | Breton, G.W.; Sugart, J.H.; Hughey, C.A.; Conrad, B.P. and Perala, S.M., Use of Cyclic Allylic Bromides in the Zinc-Mediated Aqueous Barbier-Grignard Reaction, Molecules, 6, 655-662 (2001) |
| 3 | Cooper, H.J. and Marshall, A.G., Electrospray Ionization Fourier-Transform Ion Cyclotron Resonance Mass Spectrometric Analysis of Wine, J. Agricultural and Food Chemistry, 49, 5710-5718 (2001) |
| 4 | Dibben, M.J.; Kage, D.; Szczepanski, J.; Eyler, J.R. and Vala, M.T., Photodissociation of the Fluorene Cation: A Fourier Transform Ion Cyclotron Resonance Mass Spectrometric Study, J. Phys. Chem. A, 105, 6024-9 (2001) |
| 5 | Freitas, M.A. and Marshall, A.G., Gas Phase RNA and DNA Ions 2. Conformational Dependence of the Gas-Phase H/D Exchange of Nucleotide-5'-Monophosphates, J. Am. Soc. Mass Spectr., 12 (7), 780-785 (2001) [read online] |
| 6 | Green-Church, K.; Limbach, P.A.; Freitas, M.A. and Marshall, A.G., Gas-Phase Hydrogen Deuterium Exchange of Positively Charged Mononucleotides by Use of Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, J. Am. Soc. Mass Spectr., 12 (3), 268-277 (2001) [read online] |
| 7 | Hakansson, K.; Cooper, H.J.; Emmett, M.R.; Costello, C.E.; Marshall, A.G. and Nilsson, C.L., Electron Capture Dissociation and Infrared Multiphoton Dissociation MS/MS of an N-Glycosylated Tryptic Peptide to Yield Complementary Sequence Information, Anal. Chem., 73 (18), 4530-4536 (2001) [read online] |
| 8 | Hakansson, K.; Emmett, M.R.; Hendrickson, C.L. and Marshall, A.G., High Sensitivity Electron Capture Dissociation Tandem FTICR Mass Spectrometry of Microelectrosprayed Peptides, Anal. Chem., 73 (15), 3605-3610 (2001) [read online] |
| 9 | He, F.; Hendrickson, C.L. and Marshall, A.G., Baseline Mass Resolution of Peptide Isobars: A Record for Molecular Mass Resolution, Anal. Chem., 73 (3), 647-650 (2001) [read online] |
| 10 | He, F.; Marshall, A.G. and Freitas, M.A., Hydrogen Exchange Rate Constants by Site-Specific Substitution: GlyGly, J. Phys. Chem. B, 105 (11), 2244-2249 (2001) [read online] |
| 11 | Hughey, C.A.; Hendrickson, C.L.; Rodgers, R.P. and Marshall, A.G., Elemental Composition Analysis of Processed and Unprocessed Diesel Fuel by Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Energy & Fuels, 15 (5), 1186-1193 (2001) [read online] |
| 12 | Hughey, C.A.; Hendrickson, C.L.; Rodgers, R.P.; Marshall, A.G. and Qian, K., Kendrick Mass Defect Spectroscopy: A Compact Visual Analysis for Ultrahigh-Resolution Broadband Mass Spectra, Anal. Chem., 73 (19), 4676-4681 (2001) [read online] |
| 13 | Marshall, A.G. and Hendrickson, C.L., Charge Reduction Lowers Mass Resolving Power for Isotopically Resolved Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectra, Rapid Commun. Mass Sp., 15, 232-235 (2001) |
| 14 | Palii, S.P.; Richardson, D.E.; Hansen, M.L.; Iversen, F.K.; Singerean, L.; Timco, G.A.; Gerbeleu, N.V.; Jennings, K.R. and Eyler, J.R., Mixed-Terminal-Ligand Oxo-Centered Carboxylate-Bridged Trinuclear Complexes: Gas Phase Generation by Means of Electrospray Ionization FT-ICR MS, Condensed Phase Synthesis, and X-ray Structure of K+ [C, Inorg. Chim. Acta, 319, 23-42 (2001) |
| 15 | Pires de Matos, A.; Freitas, M.A.; Marshall, A.G.; Marques, N.; Carvalho, A.; Isolani, P.C. and Vicentini, G., FT-ICR Studies of Polypyrazolyl-1-yl Borates of Europium (II) Adducts, J. Alloy Compd., 323-324, 147-149 (2001) |
| 16 | Qian, K.; Robbins, W.K.; Hughey, C.A., Cooper, H.J.; Rodgers, R.P. and Marshall, A.G., Resolution and Identification of Elemental Compositions for More than 3000 Crude Acids in Heavy Petroleum by Negative-Ion Microelectrospray High Field Fourier Transform Ion Cyclotron Resonance Mass Sp, Energy & Fuels, 15, 1505-1511 (2001) |
| 17 | Qian, K.; Rodgers, R.P.; Hendrickson, C.L.; Emmett, M.R. and Marshall, A.G., Reading Chemical Fine Print: Resolution and Identification of 3000 Nitrogen-Containing Aromatic Compounds from a Single Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrum, Energy & Fuels, 15, 492-498 (2001) |
| 18 | Quenzer, T.L.; Emmett, M.R.; Hendrickson, C.L.; Kelly, P.H. and Marshall, A.G., High Sensitivity Fourier Transform Ion Cyclotron Resonance Mass Spectrometry for Biological Analysis with Nano-LC and Microelectrospray Ionization, Anal. Chem., 73, 1721-1725 (2001) |
| 19 | Richardson, D.E.; Lang, G.-H.L.; Crestoni, E.; Ryan, M.F. and Eyler, J.R., Intrinsic Reactivity of Metal-Hydroxide Complexes: O-H Bond Activation and Adduct Formation in Gas-Phase Reactions of Cp2ZrOH, Int. J. Mass Spectrom., 204, 255-266 (2001) |
| 20 | Rodgers, R.P.; Blumer, E.N.; Freitas, M.A. and Marshall, A.G., Compositional Analysis for Identification of Arson Accelerants by Electron Ionization Fourier Transform Ion Cyclotron Resonance High-Resolution Mass Spectrometry, J. Forensic Sci., 46, 268-279 (2001) |
| 21 | Rodgers, R.P.; Hendrickson, C.L.; Emmett, M.R.; Marshall, A.G.; Greaney, M.A. and Qian, K., Molecular Characterization of Petroporphyrins in Crude Oil by Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Can. J. Chem., 79, 546-551 (2001) |
| 22 | Szczepanski, J.; Dibben, M.J.; Pearson, W.; Eyler, J.R. and Vala, M.T., Theoretical Study of the Photodissociation and Hydrogenation of the Fluorene Cation, J. Phys. Chem. A, 105, 9388-9395 (2001) |
| 23 | Wang, Y.; Hendrickson, C.L. and Marshall, A.G., Direct Optical Spectroscopy of Gas-Phase Molecular Ions Trapped and Mass-Selected by Ion Cyclotron Resonance: Laser-Induced Fluorescence Excitation Spectrum of Hexafluorobenzene (C6F6+), Chem. Phys. Lett., 334, 69-75 (2001) |
| 24 | van der Rest, G. and Marshall, A.G., Noise Analysis for Two-Dimensional Tandem FT-ICR Mass Spectrometry, Int. J. Mass Spectrom., 208, 101-111 (2001) |
| 25 | van der Rest, G.; He, F.; Emmett, M.R.; Marshall, A.G. and Gaskell, S.J., Gas-Phase Cleavage of Edman-Derivatized Electrosprayed Tryptic Peptides: Mass-Based Protein Identification Without Liquid Chromatographic Separation, J. Am. Soc. Mass Spectr., 12, 288-295 (2001) |
| 26 | van der Rest, G.; He, F.; Emmett, M.R.; Marshall, A.G. and Gaskell, S.J., New Method for Protein Identification: Edman degradation of ions in the cell of an FT-ICR, J. Am. Soc. Mass Spectr., 12, 288-295 (2001) |
2000 Publications and Scientific Activities |
| 1 | Freitas, M.A.; Hendrickson, C.L. and Marshall, A.G., Determination of Relative Ordering of Activation Energy for Gas-Phase Ion Unimolecular Dissociation by Multiphoton Infrared Irradiation, J. Am. Chem. Soc., 122, 7768-7775 (2000) |
| 2 | Freitas, M.A.; Hendrickson, C.L.; Marshall, A.G.; Rostom, A.A. and Robinson, C.V., Competitive Binding to the Oligopeptide Binding Protein, OppA: In-Trap Cleanup in an FT-ICR Mass Spectrometer, J. Am. Soc. Mass Spectr., 11, 1023-1026 (2000) |
| 3 | He, F.; Hendrickson, C.L. and Marshall, A.G., Unequivocal Determination of Metal Atom Oxidation State in Naked Heme Proteins: Fe(III)Myoglobin, Fe(III)Cytochrome c, Fe(III)Cytochrome b5, and Fe(III)Cytochrome b5 L47R, J. Am. Soc. Mass Spectr., 11, 120-126 (2000) |
| 4 | He, F.; Marshall, A.G., Weighted Quasi-Newton and Variable-Order, Variable-Step Adams Algorithm for Determining Site-Specific Reaction Rate Constants, J. Phys. Chem. A, 104, 562-567 (2000) |
| 5 | Lee, H.-N. and Marshall, A.G., Theoretical Maximal Precision for Mass-to-Charge Ratio, Amplitude, and Width Measurement in Ion-Counting Mass Analyzers, Anal. Chem., 72, 2256-2260 (2000) |
| 6 | Marshall, A.G., Milestones in Fourier Transform Ion Cyclotron Resonance Mass Spectrometry Technique Development, Int. J. Mass Spectrom., 200, 331-356 (2000) |
| 7 | Marshall, A.G.; Emmett, M.R.; Freitas, M.A.; Hendrickson, C.L. and Zhang, Z., Isotopic Amplification, H/D Exchange, and Other Mass Spectrometric Strategies for Characterization of Biomacromolecular Topology and Binding Sites, Mass Spectr. in Biology and Medicine, Ed. A. L. Burlingame and S. A. Carr (Humana Press, Totowa, NJ), 31-52 (2000) |
| 8 | Rodgers, R. P.; Blumer, E. N.; Freitas, M. A.; Marshall, A. G., Complete Compositional Monitoring of the Weathering of Transportation Fuels based on Elemental Compositions from Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Environ. Sci. Technol., 34, 1671-1678 (2000) |
| 9 | Rodgers, R.P.; Blumer, E.N.; Emmett, M.R. and Marshall, A.G., Efficacy of Bacterial Bioremediation: Demonstration of Complete Incorporation of Hydrocarbons into Membrane Phospholipids from Rhodococcus Hydrocarbon Degrading Bacteria by Electrospray Ionization Fo, Environ. Sci. Technol., 34, 535-540 (2000) |
| 10 | Rodgers, R.P.; Blumer, E.N.; Hendrickson, C.L. and Marshall, A.G., Stable Isotope Incorporation Triples the Upper Mass Limit for Determination of Elemental Composition by Accurate Mass Measurement, J. Am. Soc. Mass Spectr., 11, 835-840 (2000) |
| 11 | Shi, S.D.-H.; Drader, J.J.; Freitas, M.A.; Hendrickson, C.L. and Marshall, A.G., Comparison and Interconversion of the Two Most Common Frequency-to-Mass Calibration Functions for Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, Int. J. Mass Spectrom., 195/196, 591-598 (2000) |
| 12 | Wang, Y.; Shi, S.D.-H.; Hendrickson, C.L. and Marshall, A.G., Mass-Selective Ion Accumulation and Fragmentation in a Linear Octopole Ion Trap External to a Fourier Transform Ion Cyclotron Resonance Mass Spectrometer, Int. J. Mass Spectrom., 198, 113-120 (2000) |
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ICR Publications